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Rob Boston, AU's senior adviser, shot back at Trump after he first announced his plans to issue new guidance.

\"Any guidelines this administration produces will likely either be littered with twisted interpretations of the law or, even if they are accurate, Trump will start boasting that he 'brought prayer back to schools' or some such nonsense,\" Boston wrote in a Jan. 6 editorial on the group's website.

He added, \"If [the] Trump administration offers misleading advice on religion and public schools, we’ll be there to set the record straight and ensure our public schools remain inclusive and welcoming for all students, regardless of their religious or nonreligious beliefs.\"

\"PHOTO:
File/Bloomberg via Getty Images
PHOTO: File photo of President Donald Trump, center, during an 'Evangelicals for Trump' Coalition launch event in Miami on Jan. 3, 2020.
>

The group's leaders said in a different series of tweets that they would be \"analyzing these regs now.\"

\"We won’t let Trump's attacks on #ReligiousFreedom go unchallenged,\" the group said on Twitter.

The American Civil Liberties Union released a statement of critique following the event.

\"Government-funded programs, including those operated by faith-based organizations, should not be able to discriminate against vulnerable people seeking help,\" Heather Weaver, senior staff attorney with the ACLU Program on Freedom of Religion and Belief, said in the statement. \"We will submit comments vigorously opposing these proposed regulations.\"

This presidential action comes as Trump also seeks to shore up support among the nation’s evangelical Christians after the prominent \"Christianity Today” ran an op-ed advocating for the president’s removal from office.

The president’s reelection campaign announced the formation of an \"Evangelicals for Trump\" coalition at a Florida rally earlier this month.

\"Well, it is a cultural war. And you have two sides ... you have a side that believes so strongly in prayer and then being restricted and it's getting worse and worse and I think we've made a big impact,\" Trump said on Thursday. \"And we are loosening up a lot ... I want to loosen it up totally.\"

ABC News' Ben Gittleson and Serena Marshall contributed to this report.

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